All systems are created by K.Motomura in 2008-2009.

3つ組慣用句に基づく文法探索システム Grammar search based on idiomatic connections between triplets in proteins

探索モード:現在「PNF が core であるもの」を表示中 (nr-aa)TOP に戻る

探索履歴 (Search log)
core_triplet triplet relation sub_triplet triplet evaluation score ((Y-X)/X) relation graph
GSN +10 CWW 45960.467111
G S N C W W
CWW -9 PNF 32.388991
P N F C W W

探索グラフ (Graph)
G S N
P N F
C W W

rank core_triplet triplet relation sub_triplet triplet sub_triplet triplet count relation count sub_triplet triplet frequency (X) relation frequency (Y) evaluation score ((Y-X)/X) relation graph
1 PNF +9 CWW 78122 2684 0.000004170000 0.034356520000 8229.073903
P N F C W W
2 PNF -3 CWM 80849 999 0.000004320000 0.012356370000 2859.119064
C W M P N F
3 PNF +3 CWW 78122 810 0.000004170000 0.010368400000 2482.740634
P N F C W W
4 PNF +5 WCH 81327 604 0.000004350000 0.007426810000 1707.973639
P N F W C H
5 PNF +4 CWY 102355 471 0.000005470000 0.004601630000 840.338401
P N F C W Y
6 PNF -7 KMC 207002 1747 0.000011060000 0.008439530000 761.977537
K M C P N F
7 PNF -8 QCW 117271 429 0.000006270000 0.003658190000 582.772947
Q C W P N F
8 PNF -4 TCW 178110 989 0.000009520000 0.005552750000 582.428465
T C W P N F
9 PNF +8 MCW 56971 101 0.000003040000 0.001772830000 581.346699
P N F M C W
10 PNF +9 MCW 56971 99 0.000003040000 0.001737730000 569.815082
P N F M C W
11 PNF +2 ECW 163745 817 0.000008750000 0.004989470000 569.235028
P N F E C W
12 PNF +8 ACW 289342 2519 0.000015460000 0.008705960000 562.083938
P N F A C W
13 PNF +3 HWM 144257 592 0.000007710000 0.004103790000 531.372782
P N F H W M
14 PNF +1 WHQ 233328 1519 0.000012470000 0.006510150000 521.146038
P N F W H Q
15 PNF +9 WCN 118532 316 0.000006330000 0.002665950000 419.904712
P N F W C N
16 PNF +10 WWA 334108 2411 0.000017850000 0.007216230000 403.195422
P N F W W A
17 PNF -7 CWQ 141437 419 0.000007560000 0.002962450000 390.972754
C W Q P N F
18 PNF +6 NMC 162563 551 0.000008690000 0.003389460000 389.189985
P N F N M C
19 PNF +4 EWC 186025 624 0.000009940000 0.003354390000 336.450358
P N F E W C
20 PNF -5 WCM 56692 57 0.000003030000 0.001005430000 330.893868
W C M P N F
21 PNF +8 HMM 202277 674 0.000010810000 0.003332060000 307.272524
P N F H M M
22 PNF +4 WWD 227595 849 0.000012160000 0.003730310000 305.725714
P N F W W D
23 PNF +9 WRC 210351 724 0.000011240000 0.003441870000 305.208565
P N F W R C
24 PNF +6 CHY 203247 605 0.000010860000 0.002976670000 273.078530
P N F C H Y
25 PNF +10 KCW 118570 201 0.000006340000 0.001695200000 266.555786
P N F K C W
26 PNF -3 QCW 117271 194 0.000006270000 0.001654290000 262.990563
Q C W P N F
27 PNF -6 MCA 354550 1743 0.000018950000 0.004916090000 258.483853
M C A P N F
28 PNF +7 CYP 380017 1934 0.000020310000 0.005089250000 249.621514
P N F C Y P
29 PNF -5 CWM 80849 87 0.000004320000 0.001076080000 248.079438
C W M P N F
30 PNF -2 WYC 107521 148 0.000005750000 0.001376480000 238.575860
W Y C P N F
31 PNF +5 CRW 191678 462 0.000010240000 0.002410290000 234.323537
P N F C R W
32 PNF -8 HKM 376865 1751 0.000020140000 0.004646230000 229.718524
H K M P N F
33 PNF -10 MMC 129298 204 0.000006910000 0.001577750000 227.357081
M M C P N F
34 PNF -2 CQC 191626 426 0.000010240000 0.002223080000 216.104418
C Q C P N F
35 PNF +6 YWC 102822 117 0.000005490000 0.001137890000 206.100762
P N F Y W C
36 PNF -3 MWF 190928 403 0.000010200000 0.002110740000 205.887251
M W F P N F
37 PNF +10 CVW 196269 424 0.000010490000 0.002160300000 204.982520
P N F C V W
38 PNF +2 WMW 90121 89 0.000004820000 0.000987560000 204.071795
P N F W M W
39 PNF -4 PMW 192400 389 0.000010280000 0.002021830000 195.656088
P M W P N F
40 PNF +1 MCQ 169856 302 0.000009080000 0.001777980000 194.890371
P N F M C Q
41 PNF -3 YWY 258947 698 0.000013840000 0.002695530000 193.805666
Y W Y P N F
42 PNF -3 HMY 220604 501 0.000011790000 0.002271040000 191.654381
H M Y P N F
43 PNF -2 PYW 385865 1502 0.000020620000 0.003892550000 187.784827
P Y W P N F
44 PNF -6 PWC 159490 256 0.000008520000 0.001605120000 187.339312
P W C P N F
45 PNF +1 WKW 191938 370 0.000010260000 0.001927710000 186.952334
P N F W K W
46 PNF -9 TMR 1097006 12070 0.000058620000 0.011002670000 186.696941
T M R P N F
47 PNF +10 WEW 215309 463 0.000011510000 0.002150400000 185.906564
P N F W E W
48 PNF +5 WYM 144358 205 0.000007710000 0.001420080000 183.094188
P N F W Y M
49 PNF +4 MYC 142007 196 0.000007590000 0.001380210000 180.888188
P N F M Y C
50 PNF -2 WCW 70107 46 0.000003750000 0.000656140000 174.147118
W C W P N F
51 PNF -2 NWW 146665 201 0.000007840000 0.001370470000 173.868270
N W W P N F
52 PNF +4 WCM 56692 30 0.000003030000 0.000529180000 173.680983
P N F W C M
53 PNF +10 CTW 162746 221 0.000008700000 0.001357940000 155.149126
P N F C T W
54 PNF +5 CIH 289785 679 0.000015480000 0.002343120000 150.316365
P N F C I H
55 PNF +1 MMH 221964 396 0.000011860000 0.001784070000 149.417384
P N F M M H
56 PNF +3 ICW 166984 224 0.000008920000 0.001341450000 149.337121
P N F I C W
57 PNF -6 FCM 204767 331 0.000010940000 0.001616470000 146.732480
F C M P N F
58 PNF -2 CFH 218154 375 0.000011660000 0.001718970000 146.459527
C F H P N F
59 PNF +5 CSC 497550 1931 0.000026590000 0.003881020000 144.974415
P N F C S C
60 PNF -4 FWW 149092 173 0.000007970000 0.001160360000 144.648277
F W W P N F
61 PNF +10 CDW 167509 218 0.000008950000 0.001301420000 144.394551
P N F C D W
62 PNF +3 DMW 226949 400 0.000012130000 0.001762510000 144.335388
P N F D M W
63 PNF +6 SCY 506015 1983 0.000027040000 0.003918860000 143.931859
P N F S C Y
64 PNF +7 CMQ 179497 244 0.000009590000 0.001359350000 140.723989
P N F C M Q
65 PNF -5 WCD 180511 246 0.000009650000 0.001362800000 140.284882
W C D P N F
66 PNF -4 FMC 181325 244 0.000009690000 0.001345650000 137.880856
F M C P N F
67 PNF -4 YHM 252645 464 0.000013500000 0.001836570000 135.039333
Y H M P N F
68 PNF -6 WWW 94076 64 0.000005030000 0.000680300000 134.328796
W W W P N F
69 PNF +3 CFW 171752 211 0.000009180000 0.001228520000 132.858754
P N F C F W
70 PNF -8 WCQ 131921 124 0.000007050000 0.000939960000 132.340397
W C Q P N F
71 PNF -5 WWW 94076 63 0.000005030000 0.000669670000 132.214283
W W W P N F
72 PNF -2 CWD 172477 209 0.000009220000 0.001211760000 130.477621
C W D P N F
73 PNF +5 WHH 174589 213 0.000009330000 0.001220010000 129.771703
P N F W H H
74 PNF +7 MCR 286666 552 0.000015320000 0.001925590000 124.705603
P N F M C R
75 PNF +5 NFR 1366129 12458 0.000073000000 0.009119200000 123.920247
P N F N F R
76 PNF -1 WWH 103281 70 0.000005520000 0.000677760000 121.807560
W W H P N F
77 PNF -10 RWP 644037 2684 0.000034410000 0.004167460000 120.095723
R W P P N F
78 PNF -2 MMC 129298 108 0.000006910000 0.000835280000 119.894925
M M C P N F
79 PNF +9 MWH 101518 66 0.000005420000 0.000650130000 118.846611
P N F M W H
80 PNF -2 WMR 387257 960 0.000020690000 0.002478970000 118.795529
W M R P N F
81 PNF +8 FMC 181325 210 0.000009690000 0.001158140000 118.528605
P N F F M C
82 PNF +4 WMK 304894 591 0.000016290000 0.001938380000 117.975532
P N F W M K
83 PNF -10 FWC 135193 116 0.000007220000 0.000858030000 117.772940
F W C P N F
84 PNF +6 MCM 106125 71 0.000005670000 0.000669020000 116.975241
P N F M C M
85 PNF -4 QYW 316500 629 0.000016910000 0.001987360000 116.509004
Q Y W P N F
86 PNF -8 FNC 478140 1433 0.000025550000 0.002997030000 116.301608
F N C P N F
87 PNF +7 HCK 312668 605 0.000016710000 0.001934960000 114.812766
P N F H C K
88 PNF -5 CWI 174279 184 0.000009310000 0.001055780000 112.369344
C W I P N F
89 PNF -7 CCM 80598 39 0.000004310000 0.000483880000 111.352828
C C M P N F
90 PNF -1 MCH 135380 108 0.000007230000 0.000797750000 109.276422
M C H P N F
91 PNF -3 QWC 132674 103 0.000007090000 0.000776340000 108.504889
Q W C P N F
92 PNF +4 FTW 515757 1552 0.000027560000 0.003009170000 108.186611
P N F F T W
93 PNF -4 HWN 248969 351 0.000013300000 0.001409810000 104.970381
H W N P N F
94 PNF -10 MCF 195385 214 0.000010440000 0.001095270000 103.905743
M C F P N F
95 PNF -10 GTM 1491488 12449 0.000079700000 0.008346700000 103.728014
G T M P N F
96 PNF -1 PCM 161413 142 0.000008630000 0.000879730000 100.995088
P C M P N F
97 PNF +8 CRC 317595 546 0.000016970000 0.001719170000 100.300890
P N F C R C
98 PNF -2 QWW 184754 182 0.000009870000 0.000985090000 98.781865
Q W W P N F
99 PNF +7 CQW 117064 73 0.000006260000 0.000623590000 98.688273
P N F C Q W
100 PNF +5 WDH 250251 330 0.000013370000 0.001318680000 97.612104
P N F W D H


探索履歴をリセットして表示モードに移行 Change the view with resetting the log
1
DB:
2
表示条件
Conditions
of view
(A)
すべて (view all)
(B)
絞り込む (view limited)
であるもの
3
表示数 (number of results to be show) :

文法探索を初めからやり直す Start grammar search from the first step
1
DB :
2
初期3つ組 (first triplet) :
3
探索モード (search mode) :
4
表示数 (number of results to be show) :