All systems are created by K.Motomura in 2008-2009.

3つ組慣用句に基づく文法探索システム Grammar search based on idiomatic connections between triplets in proteins

探索モード:現在「CCK が core であるもの」を表示中 (nr-aa)TOP に戻る

探索履歴 (Search log)
core_triplet triplet relation sub_triplet triplet evaluation score ((Y-X)/X) relation graph
CPG +3 WMC 33669.350823
C P G W M C
CPG -10 CCK 307.297640
C C K C P G

探索グラフ (Graph)
C C K
C P G
C P G

rank core_triplet triplet relation sub_triplet triplet sub_triplet triplet count relation count sub_triplet triplet frequency (X) relation frequency (Y) evaluation score ((Y-X)/X) relation graph
1 CCK -3 CCM 80598 231 0.000004310000 0.002866080000 664.474440
C C M C C K
2 CCK +3 CLM 480140 7374 0.000025660000 0.015358020000 597.598035
C C K C L M
3 CCK -8 CCK 220090 1171 0.000011760000 0.005320550000 451.401675
C C K C C K
4 CCK +8 CCK 220090 1171 0.000011760000 0.005320550000 451.401675
C C K C C K
5 CCK -5 MWW 77053 143 0.000004120000 0.001855870000 449.738715
M W W C C K
6 CCK -7 CCM 80598 142 0.000004310000 0.001761830000 408.079526
C C M C C K
7 CCK +1 PCC 233070 1048 0.000012450000 0.004496500000 360.040947
C C K P C C
8 CCK -3 CCQ 201280 755 0.000010760000 0.003750990000 347.749532
C C Q C C K
9 CCK +1 CCY 160139 456 0.000008560000 0.002847530000 331.765695
C C K C C Y
10 CCK +2 VCC 332024 1811 0.000017740000 0.005454420000 306.430836
C C K V C C
11 CCK +3 CCQ 201280 616 0.000010760000 0.003060410000 283.542665
C C K C C Q
12 CCK -2 CMH 107033 160 0.000005720000 0.001494870000 260.368061
C M H C C K
13 CCK -3 CCK 220090 656 0.000011760000 0.002980600000 252.437659
C C K C C K
14 CCK +3 CCK 220090 656 0.000011760000 0.002980600000 252.437659
C C K C C K
15 CCK -5 PCC 233070 589 0.000012450000 0.002527140000 201.913281
P C C C C K
16 CCK -8 CCQ 201280 429 0.000010760000 0.002131360000 197.163642
C C Q C C K
17 CCK +2 CCC 245630 637 0.000013130000 0.002593330000 196.580712
C C K C C C
18 CCK +9 WKC 176799 321 0.000009450000 0.001815620000 191.182285
C C K W K C
19 CCK -6 CYC 167313 284 0.000008940000 0.001697420000 188.857124
C Y C C C K
20 CCK -3 CCV 316564 1016 0.000016920000 0.003209460000 188.731128
C C V C C K
21 CCK -2 WCC 71812 52 0.000003840000 0.000724110000 187.702315
W C C C C K
22 CCK -4 CWK 172190 282 0.000009200000 0.001637730000 176.992288
C W K C C K
23 CCK +2 CWN 136474 166 0.000007290000 0.001216350000 165.792369
C C K C W N
24 CCK -4 CCC 245630 518 0.000013130000 0.002108860000 159.670029
C C C C C K
25 CCK +3 CCT 266875 611 0.000014260000 0.002289460000 159.543732
C C K C C T
26 CCK +7 VCC 332024 899 0.000017740000 0.002707640000 151.611994
C C K V C C
27 CCK -4 VCC 332024 897 0.000017740000 0.002701610000 151.272479
V C C C C K
28 CCK -10 YPC 280972 616 0.000015010000 0.002192390000 145.023434
Y P C C C K
29 CCK -4 WWF 169908 210 0.000009080000 0.001235960000 135.131794
W W F C C K
30 CCK -5 NMC 162563 186 0.000008690000 0.001144170000 130.715675
N M C C C K
31 CCK +8 CCP 279553 533 0.000014940000 0.001906620000 126.634131
C C K C C P
32 CCK -3 CWC 74010 37 0.000003950000 0.000499930000 125.412158
C W C C C K
33 CCK +2 WNH 220700 328 0.000011790000 0.001486180000 125.019313
C C K W N H
34 CCK -4 CCW 82391 43 0.000004400000 0.000521900000 117.543252
C C W C C K
35 CCK -8 CCM 80598 41 0.000004310000 0.000508700000 117.114511
C C M C C K
36 CCK -9 SCC 455245 1277 0.000024330000 0.002805080000 114.310394
S C C C C K
37 CCK +3 CCV 316564 613 0.000016920000 0.001936420000 113.473604
C C K C C V
38 CCK +1 FMC 181325 199 0.000009690000 0.001097480000 112.267583
C C K F M C
39 CCK +3 FWC 135193 110 0.000007220000 0.000813650000 111.629512
C C K F W C
40 CCK -1 CWN 136474 110 0.000007290000 0.000806010000 109.525064
C W N C C K
41 CCK +9 CWP 142077 119 0.000007590000 0.000837570000 109.323323
C C K C W P
42 CCK +1 PLC 1062942 6451 0.000056800000 0.006069000000 105.850322
C C K P L C
43 CCK +7 PCC 233070 309 0.000012450000 0.001325780000 105.451959
C C K P C C
44 CCK -3 WFW 192897 211 0.000010310000 0.001093850000 105.120537
W F W C C K
45 CCK -1 CCC 245630 332 0.000013130000 0.001351630000 101.977702
C C C C C K
46 CCK +4 WFH 248483 325 0.000013280000 0.001307940000 97.504921
C C K W F H
47 CCK -2 CCC 245630 317 0.000013130000 0.001290560000 97.325095
C C C C C K
48 CCK +1 YWP 314739 520 0.000016820000 0.001652160000 97.235883
C C K Y W P
49 CCK -8 PCQ 360952 677 0.000019290000 0.001875600000 96.242853
P C Q C C K
50 CCK -5 HCC 132481 91 0.000007080000 0.000686890000 96.029128
H C C C C K
51 CCK -3 CCT 266875 357 0.000014260000 0.001337700000 92.803785
C C T C C K
52 CCK -8 YCC 164170 134 0.000008770000 0.000816230000 92.043306
Y C C C C K
53 CCK +7 SCC 455245 1018 0.000024330000 0.002236160000 90.923243
C C K S C C
54 CCK +2 CKF 353273 609 0.000018880000 0.001723880000 90.319669
C C K C K F
55 CCK +4 HCC 132481 83 0.000007080000 0.000626500000 87.499094
C C K H C C
56 CCK -4 SCC 455245 978 0.000024330000 0.002148290000 87.311328
S C C C C K
57 CCK -9 VCC 332024 520 0.000017740000 0.001566150000 87.273901
V C C C C K
58 CCK -3 CCE 243738 277 0.000013020000 0.001136470000 86.257188
C C E C C K
59 CCK +8 CCQ 201280 187 0.000010760000 0.000929050000 85.379023
C C K C C Q
60 CCK +8 CCN 193887 173 0.000010360000 0.000892270000 85.122505
C C K C C N
61 CCK +3 CCC 245630 277 0.000013130000 0.001127710000 84.918143
C C K C C C
62 CCK +10 IWW 161788 120 0.000008650000 0.000741710000 84.793930
C C K I W W
63 CCK +2 MCC 112539 58 0.000006010000 0.000515380000 84.701776
C C K M C C
64 CCK -3 CCC 245630 275 0.000013130000 0.001119570000 84.297796
C C C C C K
65 CCK +1 CKC 204873 191 0.000010950000 0.000932280000 84.159253
C C K C K C
66 CCK +8 NCW 124276 70 0.000006640000 0.000563260000 83.818666
C C K N C W
67 CCK -7 CCF 227218 226 0.000012140000 0.000994640000 80.920181
C C F C C K
68 CCK -6 CFC 226817 225 0.000012120000 0.000991990000 80.846336
C F C C C K
69 CCK -3 WFC 158998 108 0.000008500000 0.000679250000 78.948140
W F C C C K
70 CCK -6 WCC 71812 22 0.000003840000 0.000306360000 78.835595
W C C C C K
71 CCK +8 QWM 250187 264 0.000013370000 0.001055210000 77.930050
C C K Q W M
72 CCK -9 CQC 191626 154 0.000010240000 0.000803650000 77.483757
C Q C C C K
73 CCK -9 CQF 292985 353 0.000015660000 0.001204840000 75.957662
C Q F C C K
74 CCK +2 CQF 292985 351 0.000015660000 0.001198010000 75.521641
C C K C Q F
75 CCK -4 TCC 258989 273 0.000013840000 0.001054100000 75.167191
T C C C C K
76 CCK -7 CNC 210240 172 0.000011230000 0.000818110000 71.822516
C N C C C K
77 CCK +7 CCQ 201280 157 0.000010760000 0.000780010000 71.521426
C C K C C Q
78 CCK +9 CKP 517620 1035 0.000027660000 0.001999540000 71.291325
C C K C K P
79 CCK +3 CCM 80598 25 0.000004310000 0.000310180000 71.021043
C C K C C M
80 CCK +5 CEC 255708 251 0.000013660000 0.000981590000 70.837799
C C K C E C
81 CCK +3 WFH 248483 234 0.000013280000 0.000941710000 69.923543
C C K W F H
82 CCK +10 SDH 1367283 7053 0.000073060000 0.005158410000 69.603298
C C K S D H
83 CCK -7 CKP 517620 1009 0.000027660000 0.001949310000 69.475311
C K P C C K
84 CCK -8 TCC 258989 252 0.000013840000 0.000973010000 69.308176
T C C C C K
85 CCK -8 CCV 316564 375 0.000016920000 0.001184590000 69.028713
C C V C C K
86 CCK +3 CCE 243738 222 0.000013020000 0.000910810000 68.931753
C C K C C E
87 CCK -6 CKH 274460 265 0.000014670000 0.000965530000 64.834825
C K H C C K
88 CCK +2 CNM 185298 120 0.000009900000 0.000647610000 64.404512
C C K C N M
89 CCK +9 YCC 164170 94 0.000008770000 0.000572580000 64.269185
C C K Y C C
90 CCK +8 CCV 316564 345 0.000016920000 0.001089830000 63.426416
C C K C C V
91 CCK +7 QCY 241277 200 0.000012890000 0.000828920000 63.293353
C C K Q C Y
92 CCK +9 WMP 276968 263 0.000014800000 0.000949570000 63.160020
C C K W M P
93 CCK -1 CCN 193887 127 0.000010360000 0.000655020000 62.222879
C C N C C K
94 CCK +10 CCK 220090 162 0.000011760000 0.000736060000 61.586739
C C K C C K
95 CCK -10 CCK 220090 162 0.000011760000 0.000736060000 61.586739
C C K C C K
96 CCK -7 CNH 246245 201 0.000013160000 0.000816260000 61.033909
C N H C C K
97 CCK -2 DCW 182080 109 0.000009730000 0.000598640000 60.527595
D C W C C K
98 CCK +6 WAC 233649 179 0.000012490000 0.000766110000 60.361096
C C K W A C
99 CCK -4 WAC 233649 179 0.000012490000 0.000766110000 60.361096
W A C C C K
100 CCK -8 CKY 335673 369 0.000017940000 0.001099280000 60.286028
C K Y C C K


探索履歴をリセットして表示モードに移行 Change the view with resetting the log
1
DB:
2
表示条件
Conditions
of view
(A)
すべて (view all)
(B)
絞り込む (view limited)
であるもの
3
表示数 (number of results to be show) :

文法探索を初めからやり直す Start grammar search from the first step
1
DB :
2
初期3つ組 (first triplet) :
3
探索モード (search mode) :
4
表示数 (number of results to be show) :