All systems are created by K.Motomura in 2008-2009.

3つ組慣用句に基づく文法探索システム Grammar search based on idiomatic connections between triplets in proteins

探索モード:現在「CCI が core であるもの」を表示中 (nr-aa)TOP に戻る

探索履歴 (Search log)
core_triplet triplet relation sub_triplet triplet evaluation score ((Y-X)/X) relation graph
FII -4 WMC 33499.336709
W M C F I I
FII +3 CCI 151.618945
F I I C C I

探索グラフ (Graph)
F I I
C C I
F I I

rank core_triplet triplet relation sub_triplet triplet sub_triplet triplet count relation count sub_triplet triplet frequency (X) relation frequency (Y) evaluation score ((Y-X)/X) relation graph
1 CCI -8 CCQ 201280 728 0.000010760000 0.003616850000 335.277695
C C Q C C I
2 CCI -3 CCR 305805 1518 0.000016340000 0.004963950000 302.773956
C C R C C I
3 CCI +3 CCR 305805 1476 0.000016340000 0.004826610000 294.369143
C C I C C R
4 CCI +3 CNM 185298 474 0.000009900000 0.002558040000 257.347824
C C I C N M
5 CCI +2 CMH 107033 151 0.000005720000 0.001410780000 245.666107
C C I C M H
6 CCI +5 CTW 162746 344 0.000008700000 0.002113720000 242.055653
C C I C T W
7 CCI +8 CCQ 201280 519 0.000010760000 0.002578500000 238.736433
C C I C C Q
8 CCI -5 WPC 112006 156 0.000005990000 0.001392780000 231.707271
W P C C C I
9 CCI +5 CMM 105219 125 0.000005620000 0.001188000000 210.295186
C C I C M M
10 CCI +9 KWC 149179 246 0.000007970000 0.001649030000 205.865303
C C I K W C
11 CCI -4 TCC 258989 730 0.000013840000 0.002818650000 202.670511
T C C C C I
12 CCI +6 NWW 146665 205 0.000007840000 0.001397740000 177.348236
C C I N W W
13 CCI +3 MCQ 169856 272 0.000009080000 0.001601360000 175.431062
C C I M C Q
14 CCI +2 SCC 455245 1845 0.000024330000 0.004052760000 165.599591
C C I S C C
15 CCI +1 CMD 264436 590 0.000014130000 0.002231160000 156.898783
C C I C M D
16 CCI +9 CCQ 201280 341 0.000010760000 0.001694160000 156.514689
C C I C C Q
17 CCI -7 MDC 275705 603 0.000014730000 0.002187120000 147.455386
M D C C C I
18 CCI +1 NMC 162563 208 0.000008690000 0.001279500000 146.294949
C C I N M C
19 CCI +2 CWC 74010 42 0.000003950000 0.000567490000 142.494882
C C I C W C
20 CCI +7 QCC 187197 259 0.000010000000 0.001383570000 137.315205
C C I Q C C
21 CCI -5 FWC 135193 134 0.000007220000 0.000991180000 136.203224
F W C C C I
22 CCI +5 CEW 148527 157 0.000007940000 0.001057050000 132.185444
C C I C E W
23 CCI -9 MMW 139914 136 0.000007480000 0.000972030000 129.012315
M M W C C I
24 CCI +5 HQC 219762 291 0.000011740000 0.001324160000 111.760170
C C I H Q C
25 CCI -1 CCM 80598 39 0.000004310000 0.000483880000 111.352828
C C M C C I
26 CCI -6 WSW 307923 549 0.000016450000 0.001782910000 107.356761
W S W C C I
27 CCI +10 WCS 217582 258 0.000011630000 0.001185760000 100.986270
C C I W C S
28 CCI -5 CMW 48625 12 0.000002600000 0.000246790000 93.979515
C M W C C I
29 CCI +7 SCC 455245 1049 0.000024330000 0.002304250000 93.722478
C C I S C C
30 CCI -4 SCC 455245 1003 0.000024330000 0.002203210000 89.568775
S C C C C I
31 CCI -6 MYC 142007 96 0.000007590000 0.000676020000 88.088092
M Y C C C I
32 CCI +10 CCC 245630 283 0.000013130000 0.001152140000 86.779186
C C I C C C
33 CCI -3 CCH 143211 93 0.000007650000 0.000649390000 83.859042
C C H C C I
34 CCI +1 NCM 179406 145 0.000009590000 0.000808220000 83.306684
C C I N C M
35 CCI +3 CCQ 201280 182 0.000010760000 0.000904210000 83.069424
C C I C C Q
36 CCI -9 VCC 332024 491 0.000017740000 0.001478810000 82.350933
V C C C C I
37 CCI +3 YCM 158195 110 0.000008450000 0.000695340000 81.257425
C C I Y C M
38 CCI -4 WCP 176065 134 0.000009410000 0.000761080000 79.895929
W C P C C I
39 CCI +4 CMF 159564 107 0.000008530000 0.000670580000 77.646949
C C I C M F
40 CCI -2 MCH 135380 77 0.000007230000 0.000568770000 77.623004
M C H C C I
41 CCI -8 CCI 237239 235 0.000012680000 0.000990560000 77.138240
C C I C C I
42 CCI +8 CCI 237239 235 0.000012680000 0.000990560000 77.138240
C C I C C I
43 CCI +6 CQN 430256 767 0.000022990000 0.001782660000 76.537077
C C I C Q N
44 CCI +8 ICC 294850 360 0.000015760000 0.001220960000 76.494016
C C I I C C
45 CCI -1 CHK 274145 310 0.000014650000 0.001130790000 76.191408
C H K C C I
46 CCI +4 WMH 141222 82 0.000007550000 0.000580650000 75.944409
C C I W M H
47 CCI -9 TCC 258989 274 0.000013840000 0.001057960000 75.446192
T C C C C I
48 CCI -10 CYF 312344 392 0.000016690000 0.001255030000 74.194774
C Y F C C I
49 CCI -8 CCR 305805 374 0.000016340000 0.001223000000 73.842859
C C R C C I
50 CCI -9 QCC 187197 140 0.000010000000 0.000747880000 73.764976
Q C C C C I
51 CCI -8 HHW 183147 131 0.000009790000 0.000715270000 72.086911
H H W C C I
52 CCI -8 MWI 228373 197 0.000012200000 0.000862620000 69.687829
M W I C C I
53 CCI -8 WHN 216130 171 0.000011550000 0.000791190000 67.506840
W H N C C I
54 CCI +3 CCH 143211 74 0.000007650000 0.000516720000 66.522248
C C I C C H
55 CCI +8 WYA 505344 919 0.000027000000 0.001818560000 66.345598
C C I W Y A
56 CCI -9 SCC 455245 745 0.000024330000 0.001636480000 66.271922
S C C C C I
57 CCI +5 ECQ 468978 764 0.000025060000 0.001629070000 64.006435
C C I E C Q
58 CCI -2 CRP 664432 1530 0.000035500000 0.002302720000 63.857213
C R P C C I
59 CCI -9 NMW 240811 200 0.000012870000 0.000830530000 63.542426
N M W C C I
60 CCI +4 CRP 664432 1459 0.000035500000 0.002195860000 60.847499
C C I C R P
61 CCI +7 LWY 530775 923 0.000028360000 0.001738970000 60.312456
C C I L W Y
62 CCI -10 MWC 55348 10 0.000002960000 0.000180680000 60.089148
M W C C C I
63 CCI -7 CQP 446576 646 0.000023860000 0.001446560000 59.619129
C Q P C C I
64 CCI +4 WCC 71812 16 0.000003840000 0.000222800000 57.062251
C C I W C C
65 CCI +3 WCP 176065 96 0.000009410000 0.000545250000 56.955292
C C I W C P
66 CCI -2 CCY 160139 79 0.000008560000 0.000493320000 56.650197
C C Y C C I
67 CCI +2 EMC 303179 268 0.000016200000 0.000883970000 53.563785
C C I E M C
68 CCI +8 CCV 316564 292 0.000016920000 0.000922400000 53.529025
C C I C C V
69 CCI -4 YCW 111310 36 0.000005950000 0.000323420000 53.375350
Y C W C C I
70 CCI +7 TCC 258989 193 0.000013840000 0.000745210000 52.847135
C C I T C C
71 CCI +7 NCW 124276 44 0.000006640000 0.000354050000 52.314590
C C I N C W
72 CCI +10 PCC 233070 152 0.000012450000 0.000652160000 51.364718
C C I P C C
73 CCI +1 QHC 265480 197 0.000014190000 0.000742050000 51.308292
C C I Q H C
74 CCI -1 WCC 71812 14 0.000003840000 0.000194950000 49.804470
W C C C C I
75 CCI +8 CCR 305805 250 0.000016340000 0.000817510000 49.028649
C C I C C R
76 CCI -6 WHK 268208 190 0.000014330000 0.000708410000 48.428573
W H K C C I
77 CCI -5 SWM 382372 383 0.000020430000 0.001001640000 48.022397
S W M C C I
78 CCI -1 HCC 132481 45 0.000007080000 0.000339670000 46.981437
H C C C C I
79 CCI -3 CCQ 201280 103 0.000010760000 0.000511720000 46.577751
C C Q C C I
80 CCI -3 CCI 237239 143 0.000012680000 0.000602770000 46.547950
C C I C C I
81 CCI +3 CCI 237239 143 0.000012680000 0.000602770000 46.547950
C C I C C I
82 CCI -5 WHC 99472 25 0.000005320000 0.000251330000 46.283132
W H C C C I
83 CCI +7 MWW 77053 15 0.000004120000 0.000194670000 46.280285
C C I M W W
84 CCI -4 YFW 311949 245 0.000016670000 0.000785380000 46.115827
Y F W C C I
85 CCI +6 PCC 233070 135 0.000012450000 0.000579230000 45.508137
C C I P C C
86 CCI +6 GCC 404225 405 0.000021600000 0.001001920000 45.384899
C C I G C C
87 CCI -10 CCM 80598 16 0.000004310000 0.000198520000 45.093468
C C M C C I
88 CCI -7 MEC 270239 178 0.000014440000 0.000658680000 44.613341
M E C C C I
89 CCI -1 CCC 245630 147 0.000013130000 0.000598460000 44.595549
C C C C C I
90 CCI -1 WWY 142120 49 0.000007590000 0.000344780000 44.399766
W W Y C C I
91 CCI -8 TQW 467832 527 0.000025000000 0.001126470000 44.060779
T Q W C C I
92 CCI +9 GCC 404225 390 0.000021600000 0.000964810000 43.666940
C C I G C C
93 CCI -3 CCC 245630 144 0.000013130000 0.000586250000 43.665027
C C C C C I
94 CCI +2 WTH 274682 177 0.000014680000 0.000644380000 42.901645
C C I W T H
95 CCI +3 GCC 404225 383 0.000021600000 0.000947490000 42.865225
C C I G C C
96 CCI -8 HMD 418747 407 0.000022380000 0.000971950000 42.436910
H M D C C I
97 CCI +10 EYM 729044 1230 0.000038960000 0.001687140000 42.307744
C C I E Y M
98 CCI +2 MWC 55348 7 0.000002960000 0.000126470000 41.762403
C C I M W C
99 CCI +1 RCC 263028 158 0.000014060000 0.000600700000 41.738675
C C I R C C
100 CCI -7 HRN 832290 1577 0.000044470000 0.001894770000 41.603990
H R N C C I


探索履歴をリセットして表示モードに移行 Change the view with resetting the log
1
DB:
2
表示条件
Conditions
of view
(A)
すべて (view all)
(B)
絞り込む (view limited)
であるもの
3
表示数 (number of results to be show) :

文法探索を初めからやり直す Start grammar search from the first step
1
DB :
2
初期3つ組 (first triplet) :
3
探索モード (search mode) :
4
表示数 (number of results to be show) :